coffee and pc
02.01.2021

To solve "No methods found in package ‘RSQLite’ for request: —"

Recently, I started learning differential gene expression analysis using Affymetrix microarrays with Rstudio. Then, my R console started showing this warning message: No methods found in package ‘RSQLite’ for request: ‘dbListFields’ when loading ‘oligo’ I installed 'oligo' for this analysis, so probably that's why I didn't get this message before. This kept appearing whenever I started a new R session. Sometimes, when I installed a new package, it appeared in the middle of the installation process. Eventually, this Github page's advice, update both R and Bioconductor release, cleared the warning. Just FYI, my old versions were the following; R ( 4.0.2 ), Bioconductor ( 3.11 ). Checking the Bioconductor's version > …

coffee and pc
01.29.2021

dev.off() might help you out to show your plots again

Are you looking for a solution for this issue?: suddenly Rstudio's plot pane stop showing any plots. "dev.off()" might help you out! I've been stuck with this issue till few hours ago, and I thought that was my computer's problem; he/she might not be able to handle this script (namely, "arrayQualityMetrics()" in R) without restarting my R session. But that wasn't true! The solution was to add the "dev.off()" at the end of the script if I changed the output directory to other than the current working directory. Might be so basic to Data Scientists... 🙄 When I tried this, my problem was gone, made me super happy. Cannot guarantee …